None that I can think of.

I liked Homura in the series but not in the Rebellion movie

Kind of. Homuhomu.
...It is just I'm not sure anymore. She flipped out. She got creepy, and weird
Heroine? I don't know what to think. She isn't the one who "can save the day" anymore to me.. Hehe guess that is what it can be said as "fallen angel"?

(what a development she went through xD)

In a way, yes. I thought Mami had the potential to be interesting, but I lost interest in her.

Mami and Homura

Like perryperry, I liked Homura in the anime, but not in the movie.

Many of them:

First, Madoka I like her in episode 1 to 4, but suddenly changed. She dropped to the least favorite character starting from episode 5 to 6. After episode 7, I start liking Madoka again. At the end of episode 12, Madoka became Goddess I love it. She is the strongest magical girl. I loved Madoka again and she became my favorite character in the series. I feel sad after watching episode 12 of the original anime. But I feel relieved after I have finished watching 'Rebellion' movie. One of the reasons is that she is not a crybaby anymore. The other reason is she gains her self-confidence after she becomes a magical girl. The 2 main reasons are so completely different from the original anime. She is my favorite character even at the end of 'Rebellion' movie. I want to go out with Madoka after the Rebellion movie.

Second, Sayaka I also like her but dislike her starting from episode 8. She replaces Madoka to be the least favorite character from that episode. It continues to the ending of the original anime. I started to like her in the 'Rebellion' movie. She became my 3rd favorite character in the series.

Third, Mami I like her from episode 1, after episode 3, her carelessness cost her life while fighting with witch Charlotte. Mami dropped from my favorite character to my 4th favorite characters. Then in 'Rebellion' movie, Mami rose from my 4th favorite to 2nd favorite.

Fourth, Kyoko staring from episode 4, she just like Homura. She is a b**** at first. I start to like Kyoko starting from episode 7, after why she make a wish for making everyone listen to her dad's prey. Also she sacrifice herself for Sayaka. She became my 2nd favorite character after episode 9. Unfortunately, she dropped to my 4th favorite character after the 'Rebellion' movie. It doesn't mean I dislike or hate Kyoko. Because I don't like wasting food too.

Fifth, Homura the reason is just like perryperry said above. Homura is my 3rd favorite character in the original anime. Sadly, after the Rebellion movie, Homura dropped to my 5th favorite character. (which is my least favorite out of the main 5 magical girls)

Sixth, Hitomi and Kyubey I like them in the episode 1, I hate Hitomi from episode 8 to the near end of 'Rebellion' movie. And I hate Kyubey starting from episode 6 to 11. I like Kyubey again in episode 12 but hate him again in the 'Rebellion' movie because he is truly an antagonist.

It like goes around the circle.